New version of CIEL dictionary added to dropbox for April 1, 2020.
Just wanted to let folks know that I am posting a new version of the CIEL concept dictionary in the dropbox with versions including 1.6.6, 1.7.3, 1.8.3, 1.9.9, 1.10.2, 1.11.4, 2.0, 2.1 and 2.2!
Can I please remind everyone using the CIEL dictionary that this is a trust model. We are providing the service to the community and the community assists by providing concepts they require back to CIEL. This also includes translation of CIEL concepts into other languages. If you have added concepts to your dictionary and have not reported them back to CIEL, I strongly encourage you to do so (if guilt doesn’t work, then I will start to harass you :).
If this is the first time you are hearing about the MVP/CIEL concept dictionary which now comes as a standard option with the standalone appliance, you can get updates from the CIEL dropbox. You can send me an email describing your openmrs implementation, version number, country and project… and I will add you to the dropbox.
Be sure to read the wiki: https://wiki.openmrs.org/display/docs/Getting+and+Using+the+MVP-CIEL+Concept+Dictionary
NOTE THAT A NEW DISTRIBUTION METHODOLOGY FOR CIEL USING THE OPEN CONCEPT LAB WILL BE AVAILABLE SOON. PLEASE BEGIN TO TRANSITION TO THE SUBSCRIPTION MODULE.
Each version includes the global property ciel.conceptsVersion which contains the date of the release in YYYYMMDD format. A new global property update was added for 1.11+ which will force recreation of the word index as this is no longer included as part of the CIEL upload.
This release contains additional new concepts and coding updates to support applications required to monitor or treat the novel Coronavirus outbreak (COVID-19). Please be sure to update existing concepts as well since the code maps have changed.
It also includes a separate drug table which contains all of the WHO essential medication list drugs linked to the concept table. The plan is to integrate these two more closely providing concept sets of drugs which parallel the WHO classifications. The drug table may eventually become a superset of international RxNorm encoded medications from which you can select from. For now, it is just the WHO EML. We will keep the SQL separate for now so that you don’t have to overwrite your local drug table when importing the CIEL concept dictionary.
The drug table was NOT updated for this release.
Concepts added for this release:
"concept_id" "name" "Class" "Datatype" "description" "165900" "OMEPRAZOLE SODIUM" "Drug" "N/A" \N "165899" "Serum or plasma COVID-19 virus IgM antibody detection by rapid immunoassay" "Test" "Coded" \N "165899" "Serum or plasma severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2) IgM antibody detection by rapid immunoassay" "Test" "Coded" \N "165898" "Serum or plasma severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2) IgG antibody detection by rapid immunoassay" "Test" "Coded" \N "165898" "Serum or plasma COVID-19 virus IgG antibody detection by rapid immunoassay" "Test" "Coded" \N "165897" "Maternal 2019-CoV infection during pregnancy" "Diagnosis" "N/A" \N "165897" "Maternal COVID-19 infection during pregnancy" "Diagnosis" "N/A" \N "165897" "Maternal severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2) infection during pregnancy" "Diagnosis" "N/A" \N "165896" "Serum or plasma 2019-nCoV IgA antibody detection by immunoassay" "Test" "Coded" \N "165896" "Serum or plasma severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2) IgA antibody detection by immunoassay" "Test" "Coded" \N "165896" "Serum or plasma COVID-19 virus IgA antibody detection by immunoassay" "Test" "Coded" \N "165895" "Roche cobas® SARS-CoV-2 test" "Test" "Coded" "Dual target assay, specific target unique to SARS-Cov-2 (COVID-19 Coronavirus) along with a conserved region of the E-gene" "165894" "Disease due to 2019-nCoV, without lab confirmation" "Diagnosis" "N/A" "A clinical or epidemiological diagnosis of COVID-19 where laboratory confirmation is inconclusive or not available." "165894" "Disease due to severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2), without lab confirmation" "Diagnosis" "N/A" "A clinical or epidemiological diagnosis of COVID-19 where laboratory confirmation is inconclusive or not available." "165894" "2019 novel coronavirus disease (COVID-19), without lab confirmation" "Diagnosis" "N/A" "A clinical or epidemiological diagnosis of COVID-19 where laboratory confirmation is inconclusive or not available." "165893" "Provide supplemental oxygen via nasal cannula" "Procedure" "N/A" \N "165892" "Pharyngeal exudate" "Finding" "Coded" \N "165892" "Throat exudate" "Finding" "Coded" \N "165891" "Normal capillary refill time" "Finding" "N/A" \N "165891" "Normal capillary filling" "Finding" "N/A" \N "165890" "Capillary filling function" "Finding" "Coded" \N "165889" "Capillary blood specimen" "Misc" "N/A" \N "165889" "Capillary blood" "Misc" "N/A" \N "165888" "Venous blood specimen" "Misc" "N/A" \N "165888" "Venous blood" "Misc" "N/A" \N "165887" "Bronchitis due to severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2)" "Diagnosis" "N/A" \N "165887" "Bronchitis caused by 2019 novel coronavirus" "Diagnosis" "N/A" \N "165887" "Bronchitis due to COVID-19 virus" "Diagnosis" "N/A" \N "165887" "Bronchitis due to 2019-nCoV" "Diagnosis" "N/A" \N "165886" "Otitis media (OM) due to 2019-nCoV" "Diagnosis" "N/A" \N "165886" "Otitis media due to severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2)" "Diagnosis" "N/A" \N "165886" "Otitis media (OM) due to SARS-CoV-2" "Diagnosis" "N/A" \N "165886" "Otitis media (OM) caused by to 2019 novel coronavirus" "Diagnosis" "N/A" \N "165886" "Otitis media (OM) due to COVID-19 virus" "Diagnosis" "N/A" \N "165885" "Gastroenteritis due to 2019-nCoV" "Diagnosis" "N/A" \N "165885" "Gastroenteritis due to SARS-CoV-2" "Diagnosis" "N/A" \N "165885" "Gastroenteritis caused by to 2019 novel coronavirus" "Diagnosis" "N/A" \N "165885" "Gastroenteritis due to severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2)" "Diagnosis" "N/A" \N "165885" "Gastroenteritis due to COVID-19 virus" "Diagnosis" "N/A" \N "165884" "Encephalopathy due to 2019-nCoV" "Diagnosis" "N/A" \N "165884" "Encephalopathy due to COVID-19 virus" "Diagnosis" "N/A" \N "165884" "Encephalopathy due to severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2)" "Diagnosis" "N/A" \N "165884" "Encephalopathy caused by 2019 novel coronavirus" "Diagnosis" "N/A" \N "165884" "Encephalopathy due to SARS-CoV-2" "Diagnosis" "N/A" \N "165883" "Mycocarditis due to 2019-nCoV" "Diagnosis" "N/A" \N "165883" "Myocarditis due by COVID-19 coronavirus" "Diagnosis" "N/A" \N "165883" "Myocarditis caused by 2019 novel coronavirus" "Diagnosis" "N/A" \N "165883" "Myocarditis due to severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2)" "Diagnosis" "N/A" \N "165882" "History of positive test for SARS-CoV-2" "Finding" "Coded" \N "165882" "History of positive test for severe acute respiratory syndrome corona virus 2" "Finding" "Coded" \N "165881" "Pegylated interferon beta-1a" "Drug" "N/A" \N "165881" "Peginterferon beta-1a" "Drug" "N/A" \N "165881" "Plegridy" "Drug" "N/A" \N "165880" "Pegylated interferon alfa-2a" "Drug" "N/A" \N "165880" "Pegasys" "Drug" "N/A" \N "165880" "Peginterferon alfa-2a" "Drug" "N/A" \N "165879" "PegIntron" "Drug" "N/A" \N "165879" "Peginterferon alfa-2b" "Drug" "N/A" \N "165879" "Pegylated interferon alfa-2b" "Drug" "N/A" \N "165878" "Remdesivir" "Drug" "N/A" \N "165877" "Avigan" "Drug" "N/A" \N "165877" "Favilavir" "Drug" "N/A" \N "165876" "Siltuximab" "Drug" "N/A" \N "165876" "Sylvant" "Drug" "N/A" \N "165875" "Boceprevir" "Drug" "N/A" \N "165875" "Victrelis" "Drug" "N/A" \N "165874" "Olumiant" "Drug" "N/A" \N "165874" "Baricitinib" "Drug" "N/A" \N "165873" "Sarilumab" "Drug" "N/A" \N "165873" "Kevzara" "Drug" "N/A" \N "165872" "Tocilizumab" "Drug" "N/A" \N "165872" "RoActemra" "Drug" "N/A" \N "165872" "Atlizumab" "Drug" "N/A" \N "165872" "Actemra" "Drug" "N/A" \N "165871" "Patient condition unresolved" "Finding" "N/A" \N "165870" "Patient condition resolved" "Finding" "N/A" \N "165869" "Acute bronchitis due to 2019-nCoV" "Diagnosis" "N/A" \N "165869" "Acute bronchitis due to SARS-CoV-2" "Diagnosis" "N/A" \N "165869" "Acute bronchitis caused by severe acute respiratory syndrome coronavirus 2" "Diagnosis" "N/A" \N "165869" "Acute bronchitis due to 2019 novel coronavirus" "Diagnosis" "N/A" \N "165869" "Acute bronchitis due to COVID-19 virus" "Diagnosis" "N/A" \N "165868" "Lower respiratory tract infection due to 2019-nCoV" "Diagnosis" "N/A" \N "165868" "Lower respiratory tract infection due to COVID-19 virus" "Diagnosis" "N/A" \N "165868" "LRTI due to SARS-CoV-2" "Diagnosis" "N/A" \N "165868" "Lower respiratory tract infection due to severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2)" "Diagnosis" "N/A" \N "165868" "Lower respiratory tract infection due to 2019 novel coronavirus" "Diagnosis" "N/A" \N "165867" "Acute respiratory distress syndrome (ARDS) due to severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2)" "Diagnosis" "N/A" \N "165867" "Acute respiratory distress syndrome (ARDS) due to 2019-nCoV" "Diagnosis" "N/A" \N "165867" "ARDS due to SARS-CoV-2" "Diagnosis" "N/A" \N "165867" "Acute respiratory distress syndrome (ARDS) due to COVID-19 virus" "Diagnosis" "N/A" \N "165867" "Acute respiratory distress syndrome (ARDS) due to 2019 novel coronavirus" "Diagnosis" "N/A" \N "165866" "History of 2019 novel coronavirus disease (COVID-19)" "Diagnosis" "Coded" \N "165866" "History of ARDS due to SARS-CoV-2" "Diagnosis" "Coded" \N "165866" "History of severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2) disease" "Diagnosis" "Coded" \N "165865" "Xpert® Xpress SARS-CoV-2 antigen test" "Test" "Coded" \N "165865" "SARS-CoV-2 Xpert, antigen" "Test" "Coded" \N "165865" "GeneXpert SARS-CoV-2 ag" "Test" "Coded" \N "165864" "History of supplemental oxygen therapy" "Finding" "Coded" \N "165863" "NEWS" "Finding" "Numeric" "In the UK, the Royal College of Physicians has introduced a national early warning score (NEWS) to replace local or regional scores. The NEWS score is the largest national EWS effort to date and has been adopted outside the UK. A second version of the score was introduced in 2017. The revised version was optimised for the identification of sepsis, alternative oxygen targets in people with underlying lung disease, and the onset of delirium. REF: https://en.wikipedia.org/wiki/Early_warning_score" "165863" "National early warning score" "Finding" "Numeric" "In the UK, the Royal College of Physicians has introduced a national early warning score (NEWS) to replace local or regional scores. The NEWS score is the largest national EWS effort to date and has been adopted outside the UK. A second version of the score was introduced in 2017. The revised version was optimised for the identification of sepsis, alternative oxygen targets in people with underlying lung disease, and the onset of delirium. REF: https://en.wikipedia.org/wiki/Early_warning_score" "165862" "Sepsis-related organ failure assessment score" "Finding" "Numeric" "The sequential organ failure assessment score (SOFA score), previously known as the sepsis-related organ failure assessment score, is used to track a person's status during the stay in an intensive care unit (ICU) to determine the extent of a person's organ function or rate of failure. The score is based on six different scores, one each for the respiratory, cardiovascular, hepatic, coagulation, renal and neurological systems. REF: https://en.wikipedia.org/wiki/SOFA_score" "165862" "Sequential organ failure assessment score" "Finding" "Numeric" "The sequential organ failure assessment score (SOFA score), previously known as the sepsis-related organ failure assessment score, is used to track a person's status during the stay in an intensive care unit (ICU) to determine the extent of a person's organ function or rate of failure. The score is based on six different scores, one each for the respiratory, cardiovascular, hepatic, coagulation, renal and neurological systems. REF: https://en.wikipedia.org/wiki/SOFA_score" "165862" "SOFA score" "Finding" "Numeric" "The sequential organ failure assessment score (SOFA score), previously known as the sepsis-related organ failure assessment score, is used to track a person's status during the stay in an intensive care unit (ICU) to determine the extent of a person's organ function or rate of failure. The score is based on six different scores, one each for the respiratory, cardiovascular, hepatic, coagulation, renal and neurological systems. REF: https://en.wikipedia.org/wiki/SOFA_score" "165861" "Hologic Panther Fusion® SARS-CoV-2 test" "Test" "Coded" \N "165860" "CDC SARS-CoV-2 RT-PCR Panel" "Test" "N/A" "Used for ordering CDC COVID-19 panel" "165860" "Centers for Disease Control and Prevention (CDC) 2019-Novel Coronavirus (2019-nCoV) Real-Time Reverse Transcriptase (RT)-PCR Diagnostic Panel" "Test" "N/A" "Used for ordering CDC COVID-19 panel" "165859" "Abbott RealTime SARS-CoV-2 test" "Test" "Coded" "The Abbott RealTime SARS-CoV-2 assay is a real-time (rt) reverse transcriptase (RT) polymerase chain reaction (PCR) test intended for the qualitative detection of nucleic acid from the SARS-CoV-2 in nasopharyngeal (NP) and oropharyngeal (OP) swabs from patients suspected of COVID-19 by their health care provider." "165858" "Sweating" "Finding" "N/A" \N "165858" "the sweats" "Finding" "N/A" \N